Re: [AMBER] Segmentation fault in tleap

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 10 Oct 2013 20:19:34 -0400

On Oct 10, 2013, at 7:53 PM, mmalett.nmt.edu wrote:

> Hello, I was trying to create a .lib file for a molecule using the
> Antechamber tutorial found at
> http://ambermd.org/tutorials/basic/tutorial4b/ by Ross Walker and Sishi
> Tang as a guide and I am receiving a segmentation fault after reading in
> the mol2 file in tleap.
>
> Error message:
>
> Loading Mol2 file: ./PFB1.mol2
> Reading MOLECULE named PFB
> $AMBERHOME/bin/tleap: line 17: 20897 Segmentation fault (core dumped)
> $AMBERHOME/bin/teLeap -I$AMBERHOME/dat/leap/prep -I$AMBERHOME/dat/leap/lib
> -I$AMBERHOME/dat/leap/parm -I$AMBERHOME/dat/leap/cmd $*
>
> I can provide more information as required. If anyone knows what might be
> causing this any help would be appreciated.

What version of amber are you using?

>
> Michael Malett
>
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Received on Thu Oct 10 2013 - 17:30:04 PDT
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