Re: [AMBER] Superposition of 3D structures for wid type and mutants with VMD

From: Nhai <nhai.qn.gmail.com>
Date: Fri, 27 Sep 2013 04:57:33 -0400

So you nees to find the common things between two structures. May be "name CA" help.

Hai Nguyen

On Sep 26, 2013, at 10:16 PM, Yanyan ZHU <zhuyanzily.gmail.com> wrote:

> Dear All:
>
> I have some puzzles as following :
>
> a. VMD can not accomplish the superposition in my
> experiment, for the number of atoms in WT type and mutants are different .
>
> b. I wonder how should I do with the 3D structures of WT
> type and the corresponding mutants, to accomplish the superposition with
> VMD?
>
> Thank you very much for your kindhearted and give my best wishes to you.
>
>
>
>
> Yanyan Zhu
> Sichuan university, China
>
>
> September 27.2013
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Sep 27 2013 - 02:00:02 PDT
Custom Search