Hi all,
I'm new to Amber and have been trying to use CPPtraj to write some simple
RMSDs and cluster. However, CPPtraj will not write any output files for me.
Previously, when I force quit the process without first quitting CPPtraj,
my output file would be written.
For example,
after loading in my trajectories and assigning a reference, I would use the
command "rms :1-140 reference mass out <filename>"
Does anyone know what could be wrong or a possible solution?
Thank you.
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Sep 18 2013 - 09:00:02 PDT
