[AMBER] CPPtraj not producing outputs

From: Neha Sikka <nsikka22.gmail.com>
Date: Wed, 18 Sep 2013 11:51:29 -0400

Hi all,

I'm new to Amber and have been trying to use CPPtraj to write some simple
RMSDs and cluster. However, CPPtraj will not write any output files for me.
Previously, when I force quit the process without first quitting CPPtraj,
my output file would be written.

For example,
after loading in my trajectories and assigning a reference, I would use the
command "rms :1-140 reference mass out <filename>"

Does anyone know what could be wrong or a possible solution?

Thank you.
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Received on Wed Sep 18 2013 - 09:00:02 PDT
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