Hi
1. I am not very much aware about the 3-10 helixes. I understand these are
similar to alpha helixes but have 3 residues per turn while alpha helix has
3.66 res per turn. But are these 3-10 helixes are experimentally
significant? I am trying to interpret peaks for alpha helixes in CD
spectra.
2.I am using 'secstruct' in ptraj to generate secondary structure
information. There is a way to visualize these plots in 2D in cpptraj with
gnuplot. ( by gnu extension). But this can't be done in ptraj. Is there any
script available to do this.
Thank you
--
Chinthaka Nadun Ratnaweera
Hand Lab
Mississippi State University
310 Presidents Circle
Starkville, MS 39762
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Sep 14 2013 - 15:00:02 PDT
