[AMBER] Number of contacts

From: anu chandra <anu80125.gmail.com>
Date: Fri, 23 Aug 2013 18:14:09 +0530

Dear Amber users,

I am working with protein-ligand interaction. I would like to calculate the
number of contacts ligand make with the protein within a specific cut off (
say within 3.5 to 4.5 angstroms), along the simulation trajectories. How
can I get help from PTRAJ/CPPTRAJ for doing this calculation?.

Thanks in advance

Regards
Anu
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Received on Fri Aug 23 2013 - 06:00:05 PDT
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