[AMBER] SLipids force field with AMBER12

From: Thomas Evangelidis <tevang3.gmail.com>
Date: Wed, 21 Aug 2013 16:41:24 +0300

Dear Amber community,

I would like to use some lipids like sphingomyelin, which are not available
in the lipid11 ff. These lipids are available in Stockholm lipids
(Slipids)that can be combined with traditional protein AMBER ffs in
GROMACS:

http://people.su.se/~jjm/Stockholm_Lipids/Downloads.html

My question is if it is possible to convert Slipids parameters (.itp) to
AMBER parameters to run a simulation with AMBER12. If that is doable I
would be grateful if someone gives me some hints to start.


thanks,
Thomas

-- 
======================================================================
Thomas Evangelidis
PhD student
University of Athens
Faculty of Pharmacy
Department of Pharmaceutical Chemistry
Panepistimioupoli-Zografou
157 71 Athens
GREECE
email: tevang.pharm.uoa.gr
          tevang3.gmail.com
website: https://sites.google.com/site/thomasevangelidishomepage/
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Received on Wed Aug 21 2013 - 07:00:02 PDT