[AMBER] setbox command

From: Vijay Manickam Achari <vjrajamany.yahoo.com>
Date: Mon, 5 Aug 2013 05:10:53 +0100 (BST)

I am trying to put peroiodic box around my lipid bilayer structure.

I use the command 
' setbox [unit] vdw '

but I get like this:

  (using default radius 1.500000 for C22) 
  (using default radius 1.500000 for C23) 
  (using default radius 1.500000 for C24) 
  (using default radius 1.500000 for C25) 
  (using default radius 1.500000 for C26) 
  (using default radius 1.500000 for C27)
.
.
.
I did not get this kind of message in earlier modeling. Is this due to version of amber? Now I am using amber 12. Previous I used amber10. 
 
Thank you


Vijay Manickam Achari
(Phd Student c/o Prof Rauzah Hashim)
Chemistry Department,
University of Malaya,
Malaysia
vjramana.gmail.com
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Received on Sun Aug 04 2013 - 21:30:02 PDT
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