There was a very cool program called NAMOT (Nucleic Acid Modeling Tool)
that could create any type of DNA you want ..
Unfortunately, it is not developed further... which is a big pity I
believe ...
http://sourceforge.net/projects/namot/
This version still runs on my openSUSE 12.3 machine
You can do almost anything you wish to with nucleic acids ...
Best,
Vlad
On 06/19/2013 03:10 PM, Collins Nganou wrote:
> Hi Arnab,
>
> Thanks
>
>
> On Wed, Jun 19, 2013 at 8:55 AM, arnab bhattacharya <
> arnab.chemistry.gmail.com> wrote:
>
>> Hi Collins,
>>
>> You may use http://w3dna.rutgers.edu for some selected Z-DNA.
>>
>> Cheers,
>>
>> Arnab
>>
>>
>> On Wed, Jun 19, 2013 at 3:51 PM, Collins Nganou <nganoucollins.gmail.com
>>> wrote:
>>> Hi Arnab,
>>>
>>> For the DNA A and B form you may use make -na-server. See the link here
>>> below.
>>> http://structure.usc.edu/make-na/server.html
>>>
>>> I am also interested on the DNA z form.
>>>
>>> Please let me know if you find the way to have the DNA z form.
>>>
>>>
>>> Best regards
>>>
>>> Collins
>>>
>>>
>>> On Tue, Jun 18, 2013 at 9:34 AM, arnab bhattacharya <
>>> arnab.chemistry.gmail.com> wrote:
>>>
>>>> Hi,
>>>>
>>>> Wondering if nab can be used to create A and Z-DNA structures? If not,
>>> any
>>>> other suggestion please.
>>>>
>>>> Thanks in advance,
>>>>
>>>> Arnab
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>>
>>
>> --
>> Dr. Arnab Bhattacherjee
>> Post Doctoral Fellow
>> Weizmann Institute of Science
>> Rehovot, Israel
>> Email: arnab.bhattacherjee.weizmann.ac.il
>> <arnab.chemistry.gmail.com>
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--
Dr. Vlad Cojocaru
Max Planck Institute for Molecular Biomedicine
Department of Cell and Developmental Biology
Röntgenstrasse 20, 48149 Münster, Germany
Tel: +49-251-70365-324; Fax: +49-251-70365-399
Email: vlad.cojocaru[at]mpi-muenster.mpg.de
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Received on Wed Jun 19 2013 - 16:00:02 PDT
