Re: [AMBER] MPI Compilation problems Amber 12 on CentOS 6.2

From: David A Case <case.biomaps.rutgers.edu>
Date: Thu, 13 Jun 2013 08:35:37 -0400

On Thu, Jun 13, 2013, Frank Thommen wrote:
>
> When trying to build the serial (!) Amber[Tools]12 binaries on the
> cluster (CentOS 6.2), I get even other compilation errors:
>
> [...]
> In file included from
> /g/software/linux/pack/gcc-4.4/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.4.4/../../../../include/c++/4.4.4/bits/localefwd.h:42,
> from
> /g/software/linux/pack/gcc-4.4/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.4.4/../../../../include/c++/4.4.4/string:45,
> from MTKException.h:11,
> from MTKException.cpp:8:
> /g/software/linux/pack/gcc-4.4/bin/../lib/gcc/x86_64-unknown-linux-gnu/4.4.4/../../../../include/c++/4.4.4/x86_64-unknown-linux-gnu/bits/c++locale.h:52:
> error: 'uselocale' was not declared in this scope

Again, it seems to be the string library that causes problems. You could of
course google the error message (add CentOS 6.2 to the search string) to see
if this is a known problem. It doesn't seem(?) to be related to Amber code.

A workaround is to try adding the -nomtkpp flag to configure, but I'm guessing
you will get similar errors elsewhere.

....dac


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Jun 13 2013 - 06:00:02 PDT
Custom Search