When I use the mpirun to run a protein (np=32), it is reported the
following error message. However, it seems my protein is still running
correctly. I'm wondering what the error message means.
Error Message:
"
Initial FFT Slab Distribution Based on Workload Estimate:
FFT slabs assigned to 4 tasks
Maximum of 19 xy slabs per task
Maximum of 19 zx slabs per task
Count of FFT xy slabs assigned to each task:
0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 19
0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 19
Count of FFT xz slabs assigned to each task:
0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 19
0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 18
First FFT Slab Distribution Based on Actual Workload:
FFT slabs assigned to 11 tasks
Maximum of 7 xy slabs per task
Maximum of 7 zx slabs per task
Count of FFT xy slabs assigned to each task:
0 0 6 0 0 6 0 0 7 0 0 7 0 0 7 0
0 7 0 0 7 0 0 7 0 0 7 0 0 7 0 7
Count of FFT xz slabs assigned to each task:
0 0 7 0 0 7 0 0 7 0 0 7 0 0 7 0
0 7 0 0 7 0 0 7 0 0 7 0 0 6 0 6
Image Distribution at run step 355:
Count of images assigned to each task:
2826 1464 170 1154 169 1504 1508 159
1522 415 1454 1492 429 1483 279 1091
1076 134 1456 97 1488 1404 338 1433
495 1449 1105 112 1464 120 1464 129
Atom Distribution No. 5 at run step 2972:
Count of atoms assigned to each task:
1870 1219 6 1488 21 1935 1947 6
1938 0 1194 1158 3 1836 0 1474
1477 9 1874 0 1711 1851 66 1818
18 1743 1131 0 1197 0 1875 18
Atom Distribution No. 6 at run step 5889:
Count of atoms assigned to each task:
1876 1897 0 1374 12 1761 1932 0
1917 0 1899 1263 0 1294 0 1554
1815 0 1413 0 1506 1648 48 1776
0 1266 1521 0 1200 0 1857 54
"
Thank you
Li
--
Li Xiao
University of California, Irvine
Email: xiaoli19871216.gmail.com
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Received on Thu May 30 2013 - 17:00:02 PDT
