[AMBER] force field parameters for acetylated lysine

From: Senthil Natesan <sen.natesan.yahoo.com>
Date: Fri, 17 May 2013 11:03:52 -0700 (PDT)

Dear Amber Users,

I am simulating a peptide with acetylated-lysine residue and looking for its force field parameters. I went through some old posts, and it seems that people suggested to refer the following paper by Dr. Duan:Biophysical
Journal  (vol 94, pages 4579-4585) , which cross references to old paper (J.
Comput.Chem., 24 (2003), pp. 1999-2012.


Does anyone have simulated the residue (acetylated lysine) recently and have parameter files ready to share ?

Thanks in advance,

Senthil Natesan
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri May 17 2013 - 11:30:05 PDT
Custom Search