Hi all,
I want to specify a vector to keep track of the velocities of all residues
during a simulation. I am going to use this vector to find velocity
autocorrelation.
The specification of vector is given in AmberTools as
vector name mask1 mask2 ....(other options)
The mask to select all the residues is given in ambmask as ":*"
So if I specify a vector as
vector vectorforall :* :*
Will the vector "vectorforall" will keep track of the velocities of all
the residues in the simulation? If not could anyone please advise how the
command should be?
Thank you
Sajeewa Dewage
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Received on Fri May 17 2013 - 10:30:02 PDT
