Dear Amber user,
am going to use a new programme called cellulose builder to build cellulose
http://code.google.com/p/cellulose-builder/, and i have some questios:
First the program produce only .pdb and psf file, in order me to use them in amber i need to convert the psf in to
prmtop file, this is writing in the manual ( amber tool12) page 55 using chamber, is this is the correct way for me to follow?
second: how do i converted this pdb into the type suited to the leap of AMBER , which combined the Cartesian coordinate of pdb provided by this program with the atom types and atom sequence defined by AMBER(force field GLYCAM_06)?
Regards
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed May 01 2013 - 09:30:02 PDT
