On Mon, Mar 25, 2013 at 6:49 AM, Vaibhav Dixit <vaibhavadixit.gmail.com>wrote:
> Dear Dr. Jan-Philip Gehrcke and amber people,
> They system is somehow not able to use new (right) executable.
> cd $AMBERHOME points to the right (newamber/amber12) directory.
> But the command you suggested strangely gives output about old executable.
> And the creation dates/time for newamber/amber12/bin files are latest
> (today). I already have the following lines in my .bashrc which has been
> sourced.
>
> export PATH=$PATH\:$AMBERHOME/bin
> export AMBERHOME=/usr/local/newamber/amber12
> export PATH=$PATH:$AMBERHOME/exe
> export PATH=$USERPATH:$PATH
>
You are appending AMBERHOME to the PATH before you even define AMBERHOME.
Then you proceed to add AMBERHOME/exe (which does not exist in Amber 12)
to the PATH afterwards. Change these lines of your bashrc to 2 simple ones:
export AMBERHOME=/usr/local/newamber/amber12
export PATH=$PATH:$AMBERHOME/bin
As Jan-Philip mentioned, USERPATH is unrelated to Amber, so whatever you do
with that variable is up to you.
Good luck,
Jason
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Mon Mar 25 2013 - 04:30:04 PDT
