[AMBER] how can we calculate average dihedral for aMD?

From: Albert <mailmd2011.gmail.com>
Date: Sun, 24 Mar 2013 12:41:17 +0100

Hello:

  I am trying to use aMD for my sytem, and I read from the Amber 12
manual in page 160. It seems that we have to obtain information of
"average dihedral" and "average EPTOT" from previous MD . I search the
whole manual, and didn't find any information how to obtain this two
parameters for our MD simulations.

Does have anybody has any idea?

thanks a lot

Albert

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Received on Sun Mar 24 2013 - 05:00:02 PDT
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