On Fri, Mar 15, 2013 at 11:54 PM, pooja chahal <chahal.pooja.rs.gmail.com>wrote:
> Dear all,
> Can anyone tell me how to change the parameters for potential in AMBER 9
>
You can change the source code or you can change the topology file. Some
simple modifications are also available as input parameters in the mdin
file. Any approach is dangerous and should be done carefully (and
carefully checked to make sure that you made the exact changes you want).
Since Amber 9 is quite old at this point (~7 years old now, I think), the
specific help you will receive about code modifications is limited.
Your question, however, is severely limited in the details you provide,
which hinders our ability to provide helpful answers just as severely. You
never actually tell us what you want to do, any ideas you had to do it, or
anything you actually tried. There is a helpful website that was written
to help people ask 'good' questions (i.e., questions that are more likely
to be answered to your satisfaction) available here:
http://www.catb.org/esr/faqs/smart-questions.html
Good luck,
Jason
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sat Mar 16 2013 - 07:30:02 PDT
