Hi,
Thank's for all reply
My question is to calculate the angle formed between two plan function of time of my trajectory with amber
Thomas suggest the function "black box" of NAB, is there any clarification?
> From: mldodson.comcast.net
> Date: Fri, 15 Mar 2013 19:42:47 -0500
> To: amber.ambermd.org
> Subject: Re: [AMBER] angle between two plan
>
>
> On Mar 15, 2013, at 7:17 PM, steinbrt.rci.rutgers.edu wrote:
>
> > Hi,
> >
> > google is indeed a good idea, but I think all you need to do just comes
> > down to the arccos of the dot product of the two plane normals.
> >
> > Thomas
> >
>
> I agree, and IIRC, there is even a nab function "black box" that does
> exactly what the OP wanted. My main point was this is a math question
> that has nothing to do with AMBER. So a general answer generator is
> the appropriate hammer with which to hit this particular nail. Probably
> 90%+ of the list members knew the answer, but no one replied specifically.
>
> Bud
>
> >
> > On Thu, March 14, 2013 2:26 pm, M. L. Dodson wrote:
> >> Typing "angle between planes" into Google yields many hits, the first is
> >> this
> >> YouTube video:
> >>
> >> http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=1&cad=rja&ved=0CDQQtwIwAA&url=http%3A%2F%2Fwww.youtube.com%2Fwatch%3Fv%3Drwr7yZ5KLVE&ei=-RVCUc7gJOqa2gWQ1YDYBA&usg=AFQjCNG1Dhu6qbqv1PI6gwF0K3yufHJbOQ&sig2=KpwmgP42ceB3z3Ho1GRtOA&bvm=bv.43828540,d.b2I
> >>
> >> HTH,
> >> Bud Dodson
> >>
> >> On Mar 14, 2013, at 1:03 PM, Jason Swails wrote:
> >>
> >>> You need to allow more time to respond. People that know the answer will
> >>> respond as they have time (keep in mind all that reply here are
> >>> volunteers)
> >>>
> >>> --
> >>> Jason M. Swails
> >>> Quantum Theory Project
> >>> University of Florida
> >>> Ph.D. Candidate
> >>> 352-392-4032
> >>>
> >>> On Mar 14, 2013, at 12:34 PM, ". mirage" <m.o.m.live.fr> wrote:
> >>>
> >>>>
> >>>> any help please????
> >>>>
> >>>>> From: m.o.m.live.fr
> >>>>> To: amber.ambermd.org
> >>>>> Date: Thu, 14 Mar 2013 09:10:50 +0000
> >>>>> Subject: [AMBER] angle between two plan
> >>>>>
> >>>>>
> >>>>> Hi Amber user's,
> >>>>> I want to calculate the angle formed between two plan , how to do this
> >>>>> ? angle requires 3 atoms or 3 center of mass and I have two plane!
> >>>>> Thank's in advance for any help
> >>>>>
> >>>>>
> >>>>> _______________________________________________
> >>>>> AMBER mailing list
> >>>>> AMBER.ambermd.org
> >>>>> http://lists.ambermd.org/mailman/listinfo/amber
> >>>>
> >>>> _______________________________________________
> >>>> AMBER mailing list
> >>>> AMBER.ambermd.org
> >>>> http://lists.ambermd.org/mailman/listinfo/amber
> >>>
> >>> _______________________________________________
> >>> AMBER mailing list
> >>> AMBER.ambermd.org
> >>> http://lists.ambermd.org/mailman/listinfo/amber
> >>
> >> --
> >> M. L. Dodson
> >> Business email: activesitedynamics-at-gmail-dot-com
> >> Personal email: mldodson-at-comcast-dot-net
> >> Gmail: mlesterdodson-at-gmail-dot-com
> >> Phone: eight_three_two-five_63-386_one
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >> _______________________________________________
> >> AMBER mailing list
> >> AMBER.ambermd.org
> >> http://lists.ambermd.org/mailman/listinfo/amber
> >>
> >
> >
> > Dr. Thomas Steinbrecher
> > formerly at the
> > BioMaps Institute
> > Rutgers University
> > 610 Taylor Rd.
> > Piscataway, NJ 08854
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
>
> --
> M. L. Dodson
> Business email: activesitedynamics-at-gmail-dot-com
> Personal email: mldodson-at-comcast-dot-net
> Gmail: mlesterdodson-at-gmail-dot-com
> Phone: eight_three_two-five_63-386_one
>
>
>
>
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Mar 16 2013 - 04:30:03 PDT
