Hi,
'trajin' is not a command by itself - it is a keyword used as input to
either ptraj or cpptraj. You need to create an input file with the
keywords you want to execute, then run ptraj or cpptraj like:
ptraj <topology filename> <input filename>
-Dan
On Tue, Mar 12, 2013 at 8:31 AM, uday spike <udaytronic.gmail.com> wrote:
> Dear Amber users,
>
> I am trying TUTORIAL B1: Simulating a small fragment of DNA.
> In this i am able to perform/execute all the comands but im unable to
> trajin command.
> all the time when i try to execute this command i am getting error as
> trajin: command not found.
> I tried to check all the previous post regarding this error but i couldn't
> find out.
> could anyone please let me know where i am going wrong.
>
> --
> *With Best Regards,
> Thanking You,
> Uday B M*
> Msc Photonics,
> Centre for Atomic and Molecular Physics
> Manipal-576104
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-9119 (Fax)
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Received on Tue Mar 12 2013 - 08:00:03 PDT
