[AMBER] Number Excluded Atoms List Generation

From: Browning, Nicholas <nicholas.browning08.imperial.ac.uk>
Date: Thu, 7 Mar 2013 16:53:40 +0000

Dear Amber Users/Developers,

I'm currently writing some code which involves the modification of prmtop files generated from leap. I'm interested in knowing how the following list is generated, such that I can replicate it in my code.

%FLAG NUMBER_EXCLUDED_ATOMS

I've looked into the leap src and I've found snippets of code involving the numex/natex lists, but very little in the way of commentary. Does anyone have any insight into this?

Kind Regards,

Nick Browning
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Received on Thu Mar 07 2013 - 09:00:04 PST
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