Re: [AMBER] amber11 installation test files

From: Mary Varughese <maryvj1985.gmail.com>
Date: Thu, 7 Feb 2013 09:35:19 +0530

Sir,

Could you give some suggestion to rectify the error associated with igb in
my amber test output file. I mean it might be due to some error or missing
libraries.

Thank you sir

On Tue, Feb 5, 2013 at 9:26 AM, Mary Varughese <maryvj1985.gmail.com> wrote:

> Thank you sir
>
>
> On Mon, Feb 4, 2013 at 7:02 PM, David A Case <case.biomaps.rutgers.edu>wrote:
>
>> On Mon, Feb 04, 2013, Mary Varughese wrote:
>>
>> > i do explicit simulations on nucleic acids and proteins. But there is no
>> > igb inputs specified in my simulation input files.
>> > i hope there will not be any problem.(i dont know if it accounts the
>> > default value of igb)
>>
>> The default value of igb is 0 (no generalized Born). This is very clearly
>> stated in the explanation of the igb variable (p. 31 of the Amber12
>> Reference
>> Manual.)
>>
>> ...dac
>>
>>
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>>
>
>
>
> --
> Mary Varughese
> Research Scholar
> School of Pure and Applied Physics
> Mahatma Gandhi University
> India
>



-- 
Mary Varughese
Research Scholar
School of Pure and Applied Physics
Mahatma Gandhi University
India
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Received on Wed Feb 06 2013 - 20:30:03 PST
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