running build running build_py creating build creating build/lib.linux-x86_64-2.6 creating build/lib.linux-x86_64-2.6/mpi4py copying src/rc.py -> build/lib.linux-x86_64-2.6/mpi4py copying src/__init__.py -> build/lib.linux-x86_64-2.6/mpi4py creating build/lib.linux-x86_64-2.6/mpi4py/include creating build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/MPI.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pyx -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/mpi.pxi -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.i -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py running build_ext MPI C compiler: /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc MPI C++ compiler: /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicxx MPI linker: /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc checking for MPI compile and link ... /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c _configtest.c -o _configtest.o _configtest.c: In function ‘main’: _configtest.c:6:7: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable] /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc _configtest.o -o _configtest success! removing: _configtest.c _configtest.o _configtest writing build/lib.linux-x86_64-2.6/mpi4py/mpi.cfg building 'mpi4py.MPI' extension creating build/temp.linux-x86_64-2.6 creating build/temp.linux-x86_64-2.6/src /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c src/MPI.c -o build/temp.linux-x86_64-2.6/src/MPI.o In file included from src/mpi4py.MPI.c:200:0, from src/MPI.c:3: src/atimport.h: In function ‘PyMPI_StartUp’: src/atimport.h:105:7: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable] src/atimport.h: In function ‘PyMPI_CleanUp’: src/atimport.h:131:7: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable] In file included from src/MPI.c:3:0: src/mpi4py.MPI.c: In function ‘__pyx_f_6mpi4py_3MPI_mpi_active’: src/mpi4py.MPI.c:4071:7: warning: variable ‘__pyx_v_ierr’ set but not used [-Wunused-but-set-variable] src/mpi4py.MPI.c: In function ‘__pyx_f_6mpi4py_3MPI_startup’: src/mpi4py.MPI.c:4175:7: warning: variable ‘__pyx_v_ierr’ set but not used [-Wunused-but-set-variable] src/mpi4py.MPI.c: In function ‘__pyx_f_6mpi4py_3MPI_cleanup’: src/mpi4py.MPI.c:4222:7: warning: variable ‘__pyx_v_ierr’ set but not used [-Wunused-but-set-variable] src/mpi4py.MPI.c: In function ‘__pyx_f_6mpi4py_3MPI_atexit’: src/mpi4py.MPI.c:4269:7: warning: variable ‘__pyx_v_ierr’ set but not used [-Wunused-but-set-variable] In file included from src/MPI.c:3:0: src/mpi4py.MPI.c: In function ‘__pyx_pf_6mpi4py_3MPI_4Comm_Alltoallw’: src/mpi4py.MPI.c:51413:13: warning: variable ‘__pyx_v_recvbuf’ set but not used [-Wunused-but-set-variable] src/mpi4py.MPI.c:51412:13: warning: variable ‘__pyx_v_sendbuf’ set but not used [-Wunused-but-set-variable] src/mpi4py.MPI.c: In function ‘__pyx_pf_6mpi4py_3MPI_Close_port’: src/mpi4py.MPI.c:63998:12: warning: variable ‘__pyx_v_cinfo’ set but not used [-Wunused-but-set-variable] /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -shared build/temp.linux-x86_64-2.6/src/MPI.o -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/MPI.so checking for MPE availability ... checking for header 'mpe.h' ... /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c _configtest.c -o _configtest.o _configtest.c:3:17: fatal error: mpe.h: No such file or directory compilation terminated. failure. removing: _configtest.c _configtest.o failure. building 'mpi4py.MPE' extension /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c src/MPE.c -o build/temp.linux-x86_64-2.6/src/MPE.o /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -shared build/temp.linux-x86_64-2.6/src/MPE.o -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/MPE.so checking for dlopen availability ... checking for header 'dlfcn.h' ... /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o succes! checking for library 'dl' ... /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c _configtest.c -o _configtest.o /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc _configtest.o -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.dl' extension /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -DHAVE_DLFCN_H=1 -I/usr/include/python2.6 -c src/dynload.c -o build/temp.linux-x86_64-2.6/src/dynload.o /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -shared build/temp.linux-x86_64-2.6/src/dynload.o -ldl -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/dl.so running build_exe MPI C compiler: /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc MPI C++ compiler: /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicxx MPI linker: /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc building 'python2.6-mpi' executable /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -I/usr/include/python2.6 -c src/python.c -o build/temp.linux-x86_64-2.6/src/python.o creating build/exe.linux-x86_64-2.6 /usr/local/x86_64/gnu/openmpi-1.6.1-psm/bin/mpicc -Wl,-export-dynamic build/temp.linux-x86_64-2.6/src/python.o -L/usr/lib64 -L/usr/lib64/python2.6/config -lpython2.6 -o build/exe.linux-x86_64-2.6/python2.6-mpi -L/usr/lib6464 -lpthread -ldl -lutil -lm