[AMBER] stripping water molecules except few ones (384-408)

From: HM <scienceamber.gmail.com>
Date: Fri, 21 Dec 2012 11:19:37 +0100

Hi All,
I am trying to remove water and ions from my system, below mentioned is my
script which I am using with ptraj

trajin ../prod7.mdcrd
strip :WAT &!(384-408)
strip :Na+
trajout prod6_nowat.mdcrd mdcrd

I want to keep water 384 to 408 but during ptraj run these water molecules
are also stripping off.

Kindly suggest me how to proceed further..

Thanks and Regards,
HM
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Received on Fri Dec 21 2012 - 02:30:03 PST
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