I want to solvate a protein in 100 angstrom X 100 angstrom X 70
angstrom box. A certain part of the protein has to be in contact with
lipid bilayer. The xy dimensions of the lipid bilayer is 100 X 100.
I have tired various "solvate" commands in tleap to generate the
specific box size of my interest. Is there a way in amber to
generate a box size of desired dimensions? Please let me know about
it.
mani
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Received on Wed Dec 19 2012 - 19:30:03 PST
