Dear AMBER users,
I am trying to set up a simulation for a protein + ligand system with
polarizable force field (AMOEBA).
My question is that how to set up the parameters for the ligand (an organic
molecule) in a polarizable condition.
Can I get any TUTORIAL on it describing the use of AMOEBA in AMBER ?
If NOT, what is the best way to perform the complex simulation with
polarizable force field for for protein and ligand as well?
Your kind suggestions are highly appreciated.
Thanks
Jagur
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Received on Thu Dec 13 2012 - 15:00:02 PST
