Re: [AMBER] Multi-protein simulation in a box

From: Aron Broom <broomsday.gmail.com>
Date: Thu, 8 Nov 2012 11:04:43 -0500

there is nothing special about multiple proteins.

On Thu, Nov 8, 2012 at 4:28 AM, Rajeswari A. <rajeswari.biotech.gmail.com>wrote:

> Dear Amber Users,
> I want to simulate multiple number of proteins in a box. I am very confused
> in choosing what MD method will be useful to solve my problem. Can i do it
> with regular molecular dynamics simulations? I am not sure whether
> diffusion of solutes are taken care in standard MD. Is there any special
> method where i can do simulate multiple proteins in a box?
>
> Thank you.
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>



-- 
Aron Broom M.Sc
PhD Student
Department of Chemistry
University of Waterloo
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Received on Thu Nov 08 2012 - 08:30:03 PST
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