Dear all,
I have recently purchased amber, so forgive me if my questions are a little trivial.
I am trying to follow tutorial A8, which starts by uploading tleap program and paths (I am using a mac OSX sytem), the problem is that despite that (I think) I updated correctly the AMBEHOME PATH in my .bash_profile, in which I added the lines:
export AMBERHOME=/Users/fabian/TOOLS/amber/amber12
export AMBERTOOLS=$AMBERHOME/AmberTools/bin
export FPOCKET=/Users/fabian/TOOLS/fpocket/fpocket2/bin
PATH=${PATH}:${PDB_TOOLS}:${IUPred_PATH}:${PDB_CENTRALITY}:${AMBERHOME}:${AMBERTOOLS}:${AMBERHOME}/bin
The tleap program starts with a path problem:
fabian.fabians-imac { ..A8 }-> tleap
-I: Adding /Users/fabian/TOOLS/amber/amber12/dat/leap/prep to search path.
-I: Adding /Users/fabian/TOOLS/amber/amber12/dat/leap/lib to search path.
-I: Adding /Users/fabian/TOOLS/amber/amber12/dat/leap/parm to search path.
-I: Adding /Users/fabian/TOOLS/amber/amber12/dat/leap/cmd to search path.
Welcome to LEaP!
(no leaprc in search path)
>
Can somebody help me?
Thanks!!
Fabian
_______________________________
Fabian Glaser, PhD
Bioinformatics Knowledge Unit,
The Lorry I. Lokey Interdisciplinary
Center for Life Sciences and Engineering
Technion - Israel Institute of Technology
Haifa 32000, ISRAEL
fglaser.technion.ac.il
Tel: +972 4 8293701
Fax: +972 4 8225153
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Received on Sun Nov 04 2012 - 07:00:03 PST
