[AMBER] How to convert ptraj cluster commands to cpptraj

From: Catein Catherine <askamber23.hotmail.com>
Date: Sat, 20 Oct 2012 01:49:28 +0800

Dear Sir/Madam,
I have to use cpptraj to do clustering analysis as I need to do autoimage with cpptraj before doing clustering.
For ptraj, I usually use following commands.
cluster out md0to29 average pdb averagelinkage clusters 10 mass rms .C1',CA
How about cpptraj, what is the corresponding or nearest commands that can be used for cpptraj?
Best regards,
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Received on Fri Oct 19 2012 - 11:00:03 PDT
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