Dear Amber users,
I am very new to Amber, I just want to get the force filed parameters for
the metal and DNA interactions, I hope the MCPB can help me in this regard.
Actually i am working in amber12. In the manual of MTKpp, they have
mentioned that we have to run the following command to generate the .bcl
file.
sh genMetalFF.sh -n 1AMP_OH
but I don't find genMetalFF.sh file in my AMBERHOME, Is this file already
available in AMBERHOME?, if so, where can I find this file?.
Thanks in advance,
Renuka
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Received on Tue Oct 16 2012 - 08:00:04 PDT
