[AMBER] umbrella sampling

From: Elisa Frezza <elisa.frezza.gmail.com>
Date: Mon, 15 Oct 2012 09:32:26 +0200

Dear All,

I would like to do umbrella sampling and to use as restraint angle the
angle between two duplex of DNA.
How can I do this? Can I define 4 center of mass and make the restraint
using them?

Thank you in advance

Elisa

-- 
Elisa Frezza
Ph.D. Student in Materials Science and Engineering
Dipartimento di Scienze Chimiche
UniversitÓ di Padova
via Marzolo, 1
35131 Padova - Italy
Phone: +39 049 827 5149
Skype: elisa.frezza
Emai: elisa.frezza.gmail.com
         elisa.frezza.studenti.unipd.it
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Received on Mon Oct 15 2012 - 01:00:04 PDT
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