Re: [AMBER] Errors in Amber12 installation

From: David A Case <case.biomaps.rutgers.edu>
Date: Mon, 8 Oct 2012 16:33:19 -0400

On Mon, Oct 08, 2012, Sajeewa Pemasinghe wrote:
>
> I am trying to install Amber12. I am trying to install it first serial and
> then parallel.
>
> So I am typing following commands in the amber12 directory
>
> ./configure pgi>& config_serial.log &
>
> Here is my config_serial.log
>
> Checking for updates...
> AmberTools13 is up to date
> Amber13 is up to date

This is quite odd. Messages above are only found in the developers' version,
not in any of the released code. How did you obtain your copy of the code?

> pgf90-Fatal-/wsu/usr/pgi/linux86-64_2.6/12.6/bin/pgf901 TERMINATED by
> signal 11

Signal 11 problems often (usually?) come from problems in your temp directory;
see http://www.pgroup.com/support/compile.htm#comp_segs1. This probably(!?)
has nothing to do with Amber.

(Note I got that site by just typing "pgf90 signal 11" into Google.)

...dac


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Received on Mon Oct 08 2012 - 14:00:03 PDT
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