Re: [AMBER] unable to find mopac charges

From: Anogna <anognal.gmail.com>
Date: Fri, 5 Oct 2012 12:25:20 +0530

I am attaching my ligand pdb can u plz help me with this.

On Wed, Oct 3, 2012 at 5:28 PM, David A Case <case.biomaps.rutgers.edu>wrote:

> On Wed, Oct 03, 2012, Anogna wrote:
> >
> > When I tried to use antechamber to generate preparation file for
> > my complex protein (the complex pdb structure is attached in the email),
> I
> > got
> > an error message indicating "unable to find mopac charges in mopac.out".
> > I check the test case and found no problem at all.
> >
> > The command i used:
> > *antechamber -i lgn_h.pdb -fi pdb -o lgn.mol2 -fo mol2 -c bcc -nc 1 -j 5*
> > mopac.out file is also attached with this mail.
> >
> > And anyone can provide some solutions for me? Thanks!!
>
> How about just looking at what is in the mopac.out file??
>
> ...dac
>
>
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Received on Fri Oct 05 2012 - 00:00:03 PDT
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