Re: [AMBER] the origin of ELEC DV/DL in the case of softcore TI calculation of the solute with no charge by crgmask

From: David A Case <case.biomaps.rutgers.edu>
Date: Thu, 4 Oct 2012 10:16:44 -0400

On Fri, Sep 28, 2012, hironori.kokubo.takeda.com wrote:
>
> But the output file from step2w/ included ELEC term for DV/DL.
>
> EELEC = 0.5888 EHBOND = 0.0000 RESTRAINT = 14.1454

It would be very helpful to have the actual input files for a short run that
illustrates the above behavior. You describe a procedure to create such
files, but some parts of the description are a little vague, and even in the
best circumstances it would take quite a lot of work to get to a working test
case.

...thx...dac


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Oct 04 2012 - 07:30:04 PDT
Custom Search