[AMBER] Cpptraj - Autoimage

From: Fernando Martín García <fmgarcia.cbm.uam.es>
Date: Wed, 12 Sep 2012 15:11:14 +0200

 Dear Amber users,

 Recently, we have updated ambertools12 in order to use autoimage
 option. Command works fine but we have a doubt: we see water box move
 respect to anchor mask, but, is there any possibility to say cpptraj to
 make a rotation of the box respect anchor?. We are performing a MTMD and
 we want separate two subunits, but we have a rectangular box, so what we
 wanted was to orient our box to the separation direction. I don't if it
 could be possible or not.

 Thanks,

 Fernando 
-- 
 ==============================================
  Fernando Martín García
  Molecular Modelling Group - Lab 312.1
  Molecular Biology Center "Severo Ochoa"
  C/ NICOLáS CABRERA, 1.
  UAM University. Cantoblanco, 28049 Madrid. Spain.
  TEL: (+34) 91-196-4662 FAX: (+34) 91-196-4420
  Web: http://fertoledo.wordpress.com/
 ==============================================
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Received on Wed Sep 12 2012 - 06:30:05 PDT
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