I have some puzzles as following :I want to know the meaning of the
calculation of the RDF with the Mirror distribution function . Does it
means the solvent distribution of the protein surface ,or means the
solvent distribution of the protein center of the mass ? The following
is my input file :
trajin ***.mdcrd
center origin :1-229
image origin center
radialrdf 0.05 12 :1-229 :WAT closet density
I want to know the meaning of the rdf value . I am looking for you
replay and will be very grateful for your kindhearted.
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Received on Sat Sep 08 2012 - 19:00:03 PDT
