[AMBER] mechanical unfolding of nucleic acids

From: Asmita Gupta <asmita4des.gmail.com>
Date: Fri, 7 Sep 2012 11:47:13 +0530

Dear Users,

  I want to study the mechanical unfolding of a DNA quadruplex using MD
simulations. Can you please suggest how to set up starting conditions for
the system or any reference which discusses the issue. I want to keep 5'
end on one side fixed and apply force on one 3' end. Is there any tutorial
on this topic?

Thank you

Asmi
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Sep 06 2012 - 23:30:02 PDT
Custom Search