What are you trying to learn?
On Aug 22, 2012 1:57 PM, "Elaine Cheung" <playbutplay.126.com> wrote:
> Hi,
> I am trying to build a system of gp41 peptide by using force field ff99SB
> and ff12SB under surface area. I use the command "set default PBradii
> mbondi2" to prepare the prmtop file. But I don't know which value I should
> choose for igb in the mdin file, igb=2 or igb=5? Which one is better for
> the force field ff99SB and ff12SB?
>
>
> Best,
> Elaine
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Received on Wed Aug 22 2012 - 15:30:03 PDT
