[AMBER] to draw vector along the axis

From: Sangita Kachhap <sangita.imtech.res.in>
Date: Fri, 3 Aug 2012 23:24:53 +0530 (IST)

I have 30ns trajectory of protein - DNA complexes of wild type and mutant. I
want to check movement of DNA and protein in mutant as compared to wild type by
drawing vector along the DNA helical axis and protein recognition helix.

Is it posible to draw vector troughtout trajectory using ptraj?

can anyone please suggest me?

With regards
Sangita Kachhap

सूक्ष्मजीव प्रौद्योगिकी संस्थान (वैज्ञानिक औद्योगिक अनुसंधान परिषद)
Institute of Microbial Technology (A CONSTITUENT ESTABLISHMENT OF CSIR)
सैक्टर 39 ए, चण्डीगढ़ / Sector 39-A, Chandigarh
पिन कोड/PIN CODE :160036
दूरभाष/EPABX :0172 6665 201-202

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Received on Fri Aug 03 2012 - 11:00:05 PDT
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