Re: [AMBER] GPU kernel error

From: Fernando Martín García <fmgarcia.cbm.uam.es>
Date: Fri, 15 Jun 2012 14:39:18 +0200

 Sorry,

 Toolkit 4.0.13
 Devdriver_4.0_linux_64_270.41.19

 Thanks

 Fernando

 On Fri, 15 Jun 2012 05:22:07 -0700, Scott Le Grand wrote:
> What drivers/toolkit?
> On Jun 15, 2012 3:01 AM, "Fernando Martín García"
> <fmgarcia.cbm.uam.es>
> wrote:
>
>> Hello,
>>
>> We are in some trouble with with the execution of pmemd.cuda. We
>> have
>> installed Amber12 in a CentOS 6 machine with two M2090. All test
>> worked
>> fine, but when we run a MD, we have next error after 4000 steps of
>> 10000:
>>
>> Message from syslogd.francio at Jun 15 11:32:31 ...
>> kernel:Stack:
>>
>> Message from syslogd.francio at Jun 15 11:32:31 ...
>> kernel:Call Trace:
>>
>> Message from syslogd.francio at Jun 15 11:32:31 ...
>> kernel:Code: c0 00 00 00 02 74 11 48 c7 c7 50 b5 aa a0 e8 a4 00 6b
>> 00
>> e8 6a 36 6e 00 b8 00 00 00 00 eb 12 89 c0 ba 01 00 00 00 d3 e2 85
>> 14 87
>> <0f> 95 c0 0f b6 c0 48 83 c5 08 5b c3 41 55 41 54 53 48 89 fb 49
>>
>> have any idea where could it be the problem?
>>
>> Thank you
>>
>> Best regards,
>> --
>> ==============================================
>> Fernando Martín García
>> Molecular Modelling Group - Lab 312.1
>> Molecular Biology Center "Severo Ochoa"
>> C/ NICOLáS CABRERA, 5.
>> UAM University. Cantoblanco, 28049 Madrid. Spain.
>> TEL: (+34) 91-196-4662 FAX: (+34) 91-196-4420
>> Web: http://fertoledo.wordpress.com/
>> ==============================================
>>
>>
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>> http://lists.ambermd.org/mailman/listinfo/amber
>>
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-- 
 ==============================================
  Fernando Martín García
  Molecular Modelling Group - Lab 312.1
  Molecular Biology Center "Severo Ochoa"
  C/ NICOLáS CABRERA, 5.
  UAM University. Cantoblanco, 28049 Madrid. Spain.
  TEL: (+34) 91-196-4662 FAX: (+34) 91-196-4420
  Web: http://fertoledo.wordpress.com/
 ==============================================
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Received on Fri Jun 15 2012 - 06:00:04 PDT
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