Hi Vinod,
> I have installed amber11 + amber tools 1.5 with cuda and gnu compiler.
> I
> applied all
> bugfixes for AT and Amber11. I have installed serial version of Amber.
> Nvidia cuda card is C2050.
> While running test all gb test case were successfully passed but for
> "4096wat" directory which explicit PME test case
> I am getting following error
> cd 4096wat/ && ./Run.pure_wat -1 SPDP netcdf.mod
> cudaMemcpyToSymbol: SetSim copy to cSim failed the launch timed out and
> was
> terminated
> ./Run.pure_wat: Program error
My guess would be that your cuda toolkit does not match with the driver you
are using. Try getting the very latest 4.2 toolkit and latest development
driver (remove the old toolkit from your machine to avoid any unintended
clashes) and then do a full rebuild of AMBER from scratch.
All the best
Ross
/\
\/
|\oss Walker
---------------------------------------------------------
| Assistant Research Professor |
| San Diego Supercomputer Center |
| Adjunct Assistant Professor |
| Dept. of Chemistry and Biochemistry |
| University of California San Diego |
| NVIDIA Fellow |
|
http://www.rosswalker.co.uk |
http://www.wmd-lab.org/ |
| Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
---------------------------------------------------------
Note: Electronic Mail is not secure, has no guarantee of delivery, may not
be read every day, and should not be used for urgent or sensitive issues.
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Jun 14 2012 - 05:00:02 PDT
