Dear all
I made a complex of protein and a ligand by docking and after dock it came ok.I
used it for MD for which i generated parameters for the ligand.I generated the
frcmod and lib files successfully.
Now the problem is that when i am saving the complex and converting in pdb and
observing it, the ligand seems to be displaced from its position.Can anyone
explain why is it so and wat shoul i do next????
thanx
monica
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Received on Mon Jun 04 2012 - 09:00:02 PDT
