> saveamberparm complex idea.prmtop idea.inpcrd
Checking Unit.
WARNING: There is a bond of 4.697562 angstroms between: 
-------  .R<NASN 1>.A<C 15> and .R<TYR 2>.A<N 1>
WARNING: There is a bond of 4.814626 angstroms between: 
-------  .R<THR 20>.A<C 13> and .R<SER 21>.A<N 1>
WARNING: There is a bond of 3.614645 angstroms between: 
-------  .R<HIE 26>.A<C 16> and .R<VAL 27>.A<N 1>
WARNING: There is a bond of 4.353261 angstroms between: 
-------  .R<CYS 36>.A<C 10> and .R<ILE 37>.A<N 1>
WARNING: There is a bond of 3.127380 angstroms between: 
-------  .R<ARG 55>.A<C 23> and .R<LEU 56>.A<N 1>
WARNING: There is a bond of 3.484634 angstroms between: 
-------  .R<GLU 67>.A<C 14> and .R<LEU 68>.A<N 1>
WARNING: There is a bond of 3.293058 angstroms between: 
-------  .R<PRO 71>.A<C 13> and .R<LYS 72>.A<N 1>
WARNING: There is a bond of 4.404926 angstroms between: 
-------  .R<LYS 72>.A<C 21> and .R<ILE 73>.A<N 1>
WARNING: There is a bond of 3.414317 angstroms between: 
-------  .R<GLY 80>.A<C 6> and .R<ALA 81>.A<N 1>
WARNING: There is a bond of 3.320521 angstroms between: 
-------  .R<SER 102>.A<C 10> and .R<VAL 103>.A<N 1>
WARNING: There is a bond of 7.289787 angstroms between: 
-------  .R<SER 108>.A<C 10> and .R<GLU 109>.A<N 1>
WARNING: There is a bond of 3.333010 angstroms between: 
-------  .R<ILE 113>.A<C 18> and .R<GLU 114>.A<N 1>
WARNING: There is a bond of 3.077800 angstroms between: 
-------  .R<SER 121>.A<C 10> and .R<GLU 122>.A<N 1>
WARNING: There is a bond of 3.610318 angstroms between: 
-------  .R<GLU 129>.A<C 14> and .R<ASN 130>.A<N 1>
WARNING: There is a bond of 3.348633 angstroms between: 
-------  .R<ASN 130>.A<C 13> and .R<PHE 131>.A<N 1>
WARNING: There is a bond of 3.244596 angstroms between: 
-------  .R<PRO 146>.A<C 13> and .R<GLU 147>.A<N 1>
WARNING: There is a bond of 3.193377 angstroms between: 
-------  .R<PHE 148>.A<C 19> and .R<ALA 149>.A<N 1>
WARNING: There is a bond of 3.236039 angstroms between: 
-------  .R<VAL 160>.A<C 15> and .R<ARG 161>.A<N 1>
WARNING: There is a bond of 3.400754 angstroms between: 
-------  .R<LYS 174>.A<C 21> and .R<GLY 175>.A<N 1>
WARNING: There is a bond of 3.425117 angstroms between: 
-------  .R<ASP 178>.A<C 11> and .R<VAL 179>.A<N 1>
WARNING: There is a bond of 3.191259 angstroms between: 
-------  .R<SER 192>.A<C 10> and .R<ASP 193>.A<N 1>
WARNING: There is a bond of 4.334351 angstroms between: 
-------  .R<GLY 204>.A<C 6> and .R<PHE 205>.A<N 1>
WARNING: There is a bond of 3.151080 angstroms between: 
-------  .R<ALA 213>.A<C 9> and .R<LYS 214>.A<N 1>
FATAL:  Atom .R<MOL 252>.A<H 1> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C49 2> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H48 3> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C47 4> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H46 5> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C45 6> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C44 7> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H43 8> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C42 9> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H41 10> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C40 11> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H39 12> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H38 13> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C37 14> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C36 15> does not have a type.
FATAL:  Atom .R<MOL 252>.A<N 16> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C35 17> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C34 18> does not have a type.
FATAL:  Atom .R<MOL 252>.A<O 19> does not have a type.
FATAL:  Atom .R<MOL 252>.A<N33 20> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C32 21> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H31 22> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C30 23> does not have a type.
FATAL:  Atom .R<MOL 252>.A<N29 24> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H28 25> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C27 26> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C26 27> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H25 28> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C24 29> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H23 30> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C22 31> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C21 32> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H20 33> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C19 34> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H18 35> does not have a type.
FATAL:  Atom .R<MOL 252>.A<O17 36> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H16 37> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C15 38> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H14 39> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H13 40> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C12 41> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C11 42> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H10 43> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C9 44> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H8 45> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C7 46> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C6 47> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H5 48> does not have a type.
FATAL:  Atom .R<MOL 252>.A<C4 49> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H3 50> does not have a type.
FATAL:  Atom .R<MOL 252>.A<O2 51> does not have a type.
FATAL:  Atom .R<MOL 252>.A<H1 52> does not have a type.
Failed to generate parameters
Parameter file was not saved.
> quit
	Quit