On Fri, May 25, 2012, FyD wrote:
>
> > I am trying to derive partial charges for a ligand covalently bonded to
> > DNA. I guess one would need to cap the DNA ends for the charge fitting
> > procedure. What are capping residues for DNA/RNA ? Are they the same
> > ACE/NME residues as used for peptides ? Thanks.
Please see note 6 on p. 33 of the AmberTools12 Reference Manual.
....dac
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Received on Fri May 25 2012 - 05:00:06 PDT
