Re: [AMBER] help with pmemd .in file

From: Chris Chris <alpharecept.yahoo.com>
Date: Mon, 7 May 2012 18:43:13 -0700 (PDT)

after incorporating the change indicated below- the attached .out file was produced ________________________________ From: Jason Swails <jason.swails.gmail.com> To: Chris Chris <alpharecept.yahoo.com>; AMBER Mailing List <amber.ambermd.org> Sent: Monday, May 7, 2012 6:27 PM Subject: Re: [AMBER] help with pmemd .in file What was the error message?  And what version of Amber are you using? -- Jason M. Swails Quantum Theory Project, University of Florida Ph.D. Candidate 352-392-4032 On May 7, 2012, at 9:15 PM, Chris Chris <alpharecept.yahoo.com> wrote: > Can someone see what I did wrong here? > > heat 2psj ctz first time >  &cntrl >  imin=0,irest=0,ntx=1, >  nstlim=25000,dt=0.002, >  ntc=2,ntf=2, >  cut=8.0, ntb=1, >  ntpr=500, ntwx=500, >  ntt=3, gamma_ln=2.0, >  tempi=0.0, temp0=300.0, >  ntr=1, >  nmropt=1 >  / > write > 10.0 > RES 1 252 > END > END > &wt TYPE='TEMP0', istep1=0, istep2=25000, >  value1=0.1, value2=300.0, / >  &wt TYPE='END' / > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amber

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber

Received on Mon May 07 2012 - 19:00:04 PDT
Custom Search