Re: [AMBER] Building Amber 12 & python

From: Shaw, Sharon <sharon.shaw.hp.com>
Date: Fri, 4 May 2012 18:59:30 +0000

>>What does the output of this command say about which version of python is
>>being used? What does "grep PYTHON config.h" report?

% grep PYTHON config.h
PYTHON=/usr/bin/python2.4

After some research, I figured this out.
My fault, I switched compilation machines when I realized I didn't have some
RDMA libs that MVAPICH2 was looking for on my 1st machine. 1st machine where config.h
was made, has python2.4 on it and the 2nd machine, which has the RDMA libs I needed
has python2.6.

Sorry for the confusion.
Regards,

Sharon



-----Original Message-----
From: case [mailto:case.biomaps.rutgers.edu]
Sent: Thursday, May 03, 2012 3:58 PM
To: AMBER Mailing List
Subject: Re: [AMBER] Building Amber 12 & python

On Thu, May 03, 2012, Shaw, Sharon wrote:

> I am trying to build the non-CUDA part of Amber12 with MPI.
>
> ./configure -mpi intel

What does the output of this command say about which version of python is
being used? What does "grep PYTHON config.h" report?

The Amber configure script tries to figure out which version of python is
available, but there could be configurations for which this doesn't work.

You can add the "--with-python /usr/bin/python2.6" flag to configure, and/or
manually edit the bottom of your config.h file to point to the correct python.
But it would help us if we could figure out why the configure script thinks
your system has python2.4 in /usr/bin.

...thanks...dac


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Received on Fri May 04 2012 - 12:30:03 PDT
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