Hello all
I am minimizing ATP binding protein having bound ATP. I have generated parameter
for ATP.
protein structure getting minimized but ATP purine getting distorted. Can anyone
please help me to solve this.
I have used
imin=1, maxcyc=300, ntmin=2,
cut=16,ntb,igb=1
Here I am attaching .png file for distorted structure.
With regards
Sangita Kachhap
SRF
BIC,IMTECH
CHANDIGARH
______________________________________________________________________
सूक्ष्मजीव प्रौद्योगिकी संस्थान (वैज्ञानिक औद्योगिक अनुसंधान परिषद)
Institute of Microbial Technology (A CONSTITUENT ESTABLISHMENT OF CSIR)
सैक्टर 39 ए, चण्डीगढ़ / Sector 39-A, Chandigarh
पिन कोड/PIN CODE :160036
दूरभाष/EPABX :0172 6665 201-202
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Feb 22 2012 - 10:00:01 PST
