On Tue, Feb 14, 2012, Andrianopsyah Mas Jaya Putra wrote:
>
> I am an AMBER 11 user from Indonesia. Recently, I followed an AMBER
> tutorial on this page:
>
> http://ambermd.org/tutorials/advanced/tutorial8/loop11.htm
>
> However, when I tried to convert the crd file into a PDB one, I got
> this message:
>
> | New format PARM file being parsed.
> | Version = 1.000 Date = 02/13/12 Time = 11:47:40
> At line 880 of file _ambpdb.f90
> Fortran runtime error: Bad value during integer read
In this case the "crd" file is a trajectory file, not a restart file. Ambpdb
is designed to convert restart files to pdb. Use ptraj to convert trajectory
files to pdb format.
...good luck....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Feb 14 2012 - 05:00:04 PST
