Re: [AMBER] fortran error during installation

From: Bill Ross <ross.cgl.ucsf.EDU>
Date: Mon, 30 Jan 2012 17:27:26 -0800

> For reference, I have installed gfortran (4.6) using the apt-get installer.

Is gfortran on your executable path?

Bill

"Mettu, Ramgopal" <rmettu.tulane.edu> wrote:

> Hi All,
> I am trying to build Amber with CUDA support on a GPU workstation (with Ubuntu 11, with 2 Tesla 2070 GPU cards) using directions found here: http://ambermd.org/gpus/.
>
> I applied all the patches that I could find (for both Amber and AmberTools) and began building the single GPU version. I got as far as the "configure -cuda gnu" step and got this error:
>
> Testing mixed C/Fortran compilation:
> gcc -DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -c -o testp.c.o testp.c
> gfortran -O0 -c -o testp.f.o testp.f
> gcc -DSYSV -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c.o testp.f.o -lgfortran
> /usr/bin/ld: cannot find -lgfortran
> collect2: ld returned 1 exit status
> ./configure: 1874: ./testp: not found
> Error: Unable to compile mixed C/Fortran code.
> Please check your compiler settings and configure flags.
>
> For reference, I have installed gfortran (4.6) using the apt-get installer. Being inexperienced with Fortran, I'm looking for some help with how to proceed I am using gcc and g++ version 4.5 - is this correct? Can anyone tell me which version of gcc works best? Or, perhaps I have some kind of path information for the Fortran libraries missing - any pointers on which environment variables are necessary would be great. Thanks!
>
> Ram
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Received on Mon Jan 30 2012 - 17:30:03 PST
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