Re: [AMBER] problem python compiling when install AmberTools 1.5

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 26 Jan 2012 12:04:46 -0500

On Thu, Jan 26, 2012 at 10:13 AM, setyanto md <stwahyudi.md.gmail.com>wrote:

> great. It works. thanks.
>
> But, I think MMPBSA.py will not installed, is it true ?
>

It should be installed anyway (even with -nopython).


>
> What is the exactly this problem ? Why I can't compiling python2.6 ?
>
> Can I Install MMPBSA.py after install AmberTools ?
>
> Thanks
> regards
> Setyanto Tri wahyudi
>
> On Thu, Jan 26, 2012 at 9:45 PM, Jason Swails <jason.swails.gmail.com
> >wrote:
>
> > No. Just configure with the flag -nopython to use a system python
> instead.
> >
> > On Thu, Jan 26, 2012 at 9:28 AM, setyanto md <stwahyudi.md.gmail.com>
> > wrote:
> >
> > > Dear Amber User and Developer,
> > >
> > > I just install AmberTools 1.5 in my laptop (ubuntu 11.10)
> > >
> > > I just following instruction said at : http://ambermd.org/ubuntu.html
> > >
> > > but unfortunately i have error when compiling python :
> > >
> > > ----
> > > Compiling /usr/local/amber11/lib/python2.6/xml/sax/__init__.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xml/sax/_exceptions.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xml/sax/expatreader.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xml/sax/handler.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xml/sax/saxutils.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xml/sax/xmlreader.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xmllib.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/xmlrpclib.py ...
> > > Compiling /usr/local/amber11/lib/python2.6/zipfile.py ...
> > > make[1]: *** [libinstall] Error 1
> > > make[1]: Leaving directory
> > > `/usr/local/amber11/AmberTools/src/etc/Python-2.6.6'
> > > make: *** [python] Error 2
> > > ----
> > >
> > > I've check my python, i have python, python2.6, python2.7, python3,
> > > python3.2 and python3.2mu
> > >
> > > Should I delete all python except python2.6 ?
> > >
> > > Please give me any suggestion
> > >
> > > thanks
> > >
> > > best regards
> > > Setyanto Tri wahyudi
> > >
> > > Bandung-Indonesia
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> >
> >
> >
> > --
> > Jason M. Swails
> > Quantum Theory Project,
> > University of Florida
> > Ph.D. Candidate
> > 352-392-4032
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
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>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Thu Jan 26 2012 - 09:30:02 PST
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