What does
/opt/SUNWhpc/HPC8.2.1c/gnu/bin/mpif90 -show
return?
All the best,
Jason
On Wed, Jan 25, 2012 at 12:18 PM, Jorgen Simonsen <jorgen589.gmail.com>wrote:
> hi all
>
> I have compiled amber10 with the following settings
>
> ./configure_amber -intelmpi -static gfortran
>
> and it compiles fine but when I try to test it I get the following error
>
> export DO_PARALLEL='mpirun -np 2'
> make test.parallel
>
> sander.MPI: error while loading shared libraries: libgfortran.so.1:
> cannot open shared object file: No such file or directory
> ./Run.cytosine: Program error
> make[1]: *** [test.sander.BASIC] Error 1
>
> my config_amber is like this
>
> # C compiler
>
> #------------------------------------------------------------------------------
> CC= gcc
> CPLUSPLUS=g++
> CFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -O2 -m64
> $(AMBERBUILDFLAGS)
> CPPFLAGS= -DBINTRAJ -I../netcdf/include $(AMBERBUILDFLAGS)
>
>
> #------------------------------------------------------------------------------
> # Fortran preprocessing and compiler.
> # FPPFLAGS holds the main Fortran options, such as whether MPI is used.
>
> #------------------------------------------------------------------------------
> FPPFLAGS= -I/opt/SUNWhpc/HPC8.2.1c/gnu/include/ -P -DBINTRAJ -DMPI
> $(AMBERBUILDFLAGS)
> FPP= cpp -traditional $(FPPFLAGS)
> FC= /opt/SUNWhpc/HPC8.2.1c/gnu/bin/mpif90
> FFLAGS= -O0 -fno-range-check -fno-second-underscore $(LOCALFLAGS)
> $(AMBERBUILDFLAGS)
> FOPTFLAGS= -O3 -fno-range-check -fno-second-underscore $(LOCALFLAGS)
> $(AMBERBUILDFLAGS)
> FREEFORMAT_FLAG= -ffree-form
>
>
> #------------------------------------------------------------------------------
> # Loader:
>
> #------------------------------------------------------------------------------
> LOAD= /opt/SUNWhpc/HPC8.2.1c/gnu/bin/mpif90 $(LOCALFLAGS)
> $(AMBERBUILDFLAGS)
> LOADCC= gcc $(LOCALFLAGS) $(AMBERBUILDFLAGS)
> LOADLIB=
> LM= -lm
> XHOME= /usr/X11R6
> XLIBS= -L/usr/X11R6/lib64 -L/usr/X11R6/lib
>
>
> #------------------------------------------------------------------------------
> :
>
> _______________________________________________
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Wed Jan 25 2012 - 10:00:03 PST
