Thanks a lot for replying dac.
I have just checked the availability of /bin/sh and I have it.
Moreover I had already tried to change the permissions of that bash script
as follows:
chmod a+x test_amber_serial.sh
and I get the following error(s):
###################################################################
make[1]: Entering directory `/home/max/amber11/test'
cd dmp && ./Run.dmp
/bin/sh: ./Run.dmp: Permission denied
make[1]: [test.sander.BASIC.nopar] Error 126 (ignored)
cd adenine && ./Run.adenine
/bin/sh: ./Run.adenine: Permission denied
make[1]: [test.sander.BASIC.nopar] Error 126 (ignored)
cd variable_14 && ./Run.variable_14_igb1
/bin/sh: ./Run.variable_14_igb1: Permission denied
***
***
***
make[1]: [test.serial.pmemd] Error 126 (ignored)
Finished serial test suite for Amber 11 at Thu Jan 19 19:12:40 GMT 2012.
make[1]: Target `test.serial' not remade because of errors.
make[1]: Leaving directory `/home/max/amber11/test'
0 file comparisons passed
0 file comparisons failed
354 tests experienced errors
####################################################################
which still seems related to a permissions matter.
Even though I can not figure out why I have these problems, as I did not
modify any permission of any file/directory and AT1.5 did not create
any trouble.
Best,
Il 19 gennaio 2012 19:06, David A Case <case.biomaps.rutgers.edu> ha scritto:
> On Thu, Jan 19, 2012, Massimiliano Porrini wrote:
>
>> ./test_amber_serial.sh
>> make: execvp: ./test_amber_serial.sh: Permission denied
>
> Check the permissions on the file amber11/test/test_amber_serial.sh: it needs
> to have execute permission. [It is theoretically possible that /bin/sh is
> not available on your system, but that seems rather unlikely....]
>
> ....dac
>
>
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--
Dr Massimiliano Porrini
Institute for Condensed Matter and Complex Systems
School of Physics & Astronomy
The University of Edinburgh
James Clerk Maxwell Building
The King's Buildings
Mayfield Road
Edinburgh EH9 3JZ
Tel +44-(0)131-650-5229
E-mails : M.Porrini.ed.ac.uk
mozz76.gmail.com
maxp.iesl.forth.gr
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Received on Thu Jan 19 2012 - 11:30:04 PST
